CDS

Accession Number TCMCG057C46927
gbkey CDS
Protein Id XP_018447720.1
Location join(29567556..29568259,29568344..29568539,29568613..29568676,29568780..29568864,29568945..29568995,29569075..29569137,29569226..29569355)
Gene LOC108819220
GeneID 108819220
Organism Raphanus sativus

Protein

Length 430aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018592218.1
Definition PREDICTED: actin-related protein 6 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category Z
Description Belongs to the actin family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
ko03110        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K11662        [VIEW IN KEGG]
ko:K12735        [VIEW IN KEGG]
EC 5.2.1.8        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005198        [VIEW IN EMBL-EBI]
GO:0005200        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009845        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009910        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048581        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090351        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000242        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGAACAACATAGTGGTGCTAGACAACGGCGGTGGACTCATCAAAGCCGGCCAAGGCGGCGAATGTGATCCCCTCGTCGTGATCCCAAACTGCCTCTTCAAACCTCTCTCCTCCAAGAAATTCATCTTCCCTCCTCCTCTCTCCCACGGCGCAGACGTCGACATCGACTTAACCTCCGCCGCCGTACGCCGCCCCATCGACAGAGGCTACCTCATAAACCCCGACCTGCAACGCGACATCTGGTCACACCTCTTCACCTCACTCCTCCGCATCACCCCAACCTCCTCCTCTCTCCTCCTCACAGAGCCGCCACTCTCCATCCCTTCCGTCCAACGCGCCACCGACGAGCTCGTCTTCGAGGATTTCGGCTTCTCTTCCCTCTACCTCGCTAATCCTCAGTCACTTGTCCATCTCTACGAAGCTAGTCGCCGGCCAGGGTCCATCCTCTCGCGGACTCAGTGTAGCCTCGTCGTGGACTGTGGCTTCTCCTTCACTCACGCCGTCCCCGTCCTCCACAACTTCACGCTCAATCACGCCATCAAGAGGATCGATCTCGGAGGCAAAGCTTTCACCAATTACTTGAAGGAACTGGTCTCTTATCGATCCATTAATGTGATGGATCAAACTTTCTTGATGGATGATGCTAAAGAGAAGCTCTGCTTCGTCTCTCTTCACCTCCACCGTGATCTCAACCTTGCTCGGGAGCGGCGTAATGGGAACGTGATAAAGTCTACATATGTTCTTCCTGATGGTGTCACACATACCAAAGGTTATGTCAAAGATCCTCAATCTGCCATGAACTTCCTTACTTTAGGCTTATCCGATGAAGGACCTAACACTCTCCTCGATACTAAGCTTGACAACGTTGAGAGGAAGAAGGCTGACATGAACAAAAACGAGATTGATTTGACAAATGAGCGTTTTCTTGTACCTGAGACGTTATTCCAGCCTGCAGATCTAGGGATGAATCAGGCGGGACTTGCAGAGTGCATTGTCCGAGCTGTTAGCTCATGCCATTCTTACTTGCAACCTGTTTTGTACCAAAGCATCATCTTAACTGGTGGAAGCACATTATTTCCTCAACTTAAGGAGAGGCTTGAAAGAGAGCTTCGACCACTTGTCCCAGACCACTTTGATGTGAAGATAATAACTCAGGAGGACCCCATACTAGGTGTATGGAGAGGGGGTTCAGTTTTGGCTTCCAGCCCAGATTTTGAGTCCATGTGTGTCACCAAGGCTGAATACGAAGAACTTGGATCGGCTCGATGTCGGAGAAGATTCTTTCACTGA
Protein:  
MSNNIVVLDNGGGLIKAGQGGECDPLVVIPNCLFKPLSSKKFIFPPPLSHGADVDIDLTSAAVRRPIDRGYLINPDLQRDIWSHLFTSLLRITPTSSSLLLTEPPLSIPSVQRATDELVFEDFGFSSLYLANPQSLVHLYEASRRPGSILSRTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYRSINVMDQTFLMDDAKEKLCFVSLHLHRDLNLARERRNGNVIKSTYVLPDGVTHTKGYVKDPQSAMNFLTLGLSDEGPNTLLDTKLDNVERKKADMNKNEIDLTNERFLVPETLFQPADLGMNQAGLAECIVRAVSSCHSYLQPVLYQSIILTGGSTLFPQLKERLERELRPLVPDHFDVKIITQEDPILGVWRGGSVLASSPDFESMCVTKAEYEELGSARCRRRFFH